PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09368.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 669aa MW: 77772.6 Da PI: 6.922

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	5e-23	58	142	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAk GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++ vk+ + ++w++ ++eleHnH+++ PIN09368.1 58 DFYNVYAKGQGFGIRVSNSWFRSKRRERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVIVKLVDAQRWRIVEVELEHNHPVS 142 6*******************99999***********99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MEAVCLNSQP VFGEGDEYED GGCSMVEQSD EAQEMQLKKE SLPPTVGLEF ESFDEAYDFY 60 NVYAKGQGFG IRVSNSWFRS KRRERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVIV 120 KLVDAQRWRI VEVELEHNHP VSPEIKRFYK SHKKMFLAAK KGKLPEPVQE IHTIKVYRTA 180 VVDAICNGHS KTDDRDDRTP VDHSKHLDLK EGDAHAVYNY FCRMKLTNPN FFYLMDFDDE 240 GHLKNVFWAD ARSRIAYNYF SDTITLDTAS LTNKYEIPLI SFVGVNHHGQ SVLLGCGFLG 300 QESVEYFVWM FRAWLTCMLG QHPQVIVTDL SRPLHIAVSE VFPQARHCYC LSYIMHRVPE 360 KLGGLDGFEA IKRQLNKAVY DSLKISEFEA FWGEMINQHS LRDNKWLQLL YEDRQRWAPV 420 YLKDTSFLGM LSPVNEREGS SAFFDGYVHK HTSFKEFLDK YDLALQRKHL KEAMEDFESR 480 NSSFELKTKS KFEFQLSKVY TKEMFKKCQI EVEGMYSCFN TKQVTINGPI VTFVVKERIE 540 VEGSEKEVRH YEVLYETTQN EVRCICSLFN FKGYLCRHAL SVLNYNGVEE IPSQYILPRW 600 NKAYKRNFPV DIGLSEADVY SPVQWYNHLF RRALKVVEEG AQSLEHYEAV MQELNSLLTK 660 LSLIDKNIM

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MEAVCLNSQP VFGEGDEYED GGCSMVEQSD EAQEMQLKKE SLPPTVGLEF ESFDEAYDFY  60
NVYAKGQGFG IRVSNSWFRS KRRERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVIV  120
KLVDAQRWRI VEVELEHNHP VSPEIKRFYK SHKKMFLAAK KGKLPEPVQE IHTIKVYRTA  180
VVDAICNGHS KTDDRDDRTP VDHSKHLDLK EGDAHAVYNY FCRMKLTNPN FFYLMDFDDE  240
GHLKNVFWAD ARSRIAYNYF SDTITLDTAS LTNKYEIPLI SFVGVNHHGQ SVLLGCGFLG  300
QESVEYFVWM FRAWLTCMLG QHPQVIVTDL SRPLHIAVSE VFPQARHCYC LSYIMHRVPE  360
KLGGLDGFEA IKRQLNKAVY DSLKISEFEA FWGEMINQHS LRDNKWLQLL YEDRQRWAPV  420
YLKDTSFLGM LSPVNEREGS SAFFDGYVHK HTSFKEFLDK YDLALQRKHL KEAMEDFESR  480
NSSFELKTKS KFEFQLSKVY TKEMFKKCQI EVEGMYSCFN TKQVTINGPI VTFVVKERIE  540
VEGSEKEVRH YEVLYETTQN EVRCICSLFN FKGYLCRHAL SVLNYNGVEE IPSQYILPRW  600
NKAYKRNFPV DIGLSEADVY SPVQWYNHLF RRALKVVEEG AQSLEHYEAV MQELNSLLTK  660
LSLIDKNIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein