PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09442.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 297aa    MW: 33225.9 Da    PI: 6.7785
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.9e-2174122355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++    +r++lg+f tae+Aa+a+++a+k+++g
  PIN09442.1  74 YRGIRQRP-WGKWAAEIRDPRK---GTRVWLGTFNTAEQAARAYDEAAKRIRG 122
                 9*******.**********954...4************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MCGGSIISDE PIIKKRGKLS TEEFWAELDS ISQLWGFSCS NDAKNQPKET VHKPIEEEKD  60
KAERGHERPR KTMYRGIRQR PWGKWAAEIR DPRKGTRVWL GTFNTAEQAA RAYDEAAKRI  120
RGDKAKLNFP NDRQPPTPPQ QPPPKRLCVN PKLPKEPSPM PTVEPSPMLP VEPSPPQQPP  180
AKRLCVTPNL PKEPSPVLPV EPSPKPPVEV SPKPPVEPRP KPLVEPSPAM GYGLQSQEPY  240
YPSGCELIKD ELSSLESFLG LEPAPQSSEV GLGEQVESVD LWMMDEFAAA QQHNLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.19e-39ERF family protein