PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09479.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 244aa    MW: 26689 Da    PI: 4.6851
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.51.1e-181378164
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew...yfFskr 64
                lppGfrFhPtdeel+++yL +k+++ +++  ++i +vd++k+ePwdLp  v++ ++ew     F k+
  PIN09479.1 13 LPPGFRFHPTDEELITYYLINKISDANFTG-RAIGDVDLNKCEPWDLPVLVSKIQDEWvvcRVFQKS 78
                79*************************999.89***************7555555677333234333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAAEGGEMKD EKLPPGFRFH PTDEELITYY LINKISDANF TGRAIGDVDL NKCEPWDLPV  60
LVSKIQDEWV VCRVFQKSAG GKKYPSNHSR AVNPYTYNLD QIPQNPMQPQ MIQPDNFQFP  120
GRNYMTPAEM QEFNKVFRGA ASTSMINLPI SPQVTYGPPG GSPFTISGLH INLSGGVAPS  180
QPFMRAAPPP PGMNQQDASS AMLNGGGPIG DQAAGYGGDM NNANAMNGRF MSMDADLDNY  240
WPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-26NAC family protein