PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09536.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARR-B

Protein Properties

Length: 470aa MW: 53340.6 Da PI: 6.7987

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.3	8.3e-24	188	241	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ W+ +LH++Fv+av+ + G +kA Pk+ilelm+v+ L +e+v+SHLQkYRl PIN09536.1 188 KPRVIWSADLHQKFVKAVNLI-GLDKAGPKKILELMEVPWLKRENVASHLQKYRL 241 79***************99.******************************8 PP
2	Myb_DNA-binding	30.2	1e-09	192	240	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++++++++v+av++ G + +k+I + m + ++++ s++qky+ PIN09536.1 192 IWSADLHQKFVKAVNLIGLDkaGPKKILELMEvPWLKRENVASHLQKYR 240 5******************************999**********7 PP
3	Response_reg	66.3	1.4e-22	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vd +p ++ l+++ +k +y e++++ +eal+ll+e++ +D+++ +mp+m+G+e+l++ + ++p+i++++ ge + + ++++ Ga PIN09536.1 20 VLLVDHDPESLKYLEKLHKKCKY-EITTCNLMQEALKLLRERKdrFDIVISEFNMPDMNGFEFLQHVSLQM-DIPVIIMSSDGETSRVMNVVEKGAC 114 89*******************.***********888778******************7755.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ +el++ PIN09536.1 115 DYLVKPIRLKELRN 128 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MVLGGLSSSS SSSFPEGLRV LLVDHDPESL KYLEKLHKKC KYEITTCNLM QEALKLLRER 60 KDRFDIVISE FNMPDMNGFE FLQHVSLQMD IPVIIMSSDG ETSRVMNVVE KGACDYLVKP 120 IRLKELRNIW QHVLRKRVQH VRDIEHPAEI QTSRNESGQP DTILGKKRKD FENKNHDREC 180 GDRSSVKKPR VIWSADLHQK FVKAVNLIGL DKAGPKKILE LMEVPWLKRE NVASHLQKYR 240 LNLSRMQKEK ELKAASGWIK RSDIFTKDVY FQHSVSQNVV TTENFVPGGL HIHDATICEG 300 NPSAILSTPV ALESNNTVFR DVIDPPISTT SGISFNQSFG PPDSKVHSQH IIQNQFTWSA 360 KVPSIQFQQQ LKPHYVIGEA ADIENAAAFF WGLQGNLTFN PDSSSTWTTM NHSSEQNLHD 420 NLLISDGFSS FVDIYAENPE LLDFESSNDF QAKNLSIPVE NLVIDPAHPK

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MVLGGLSSSS SSSFPEGLRV LLVDHDPESL KYLEKLHKKC KYEITTCNLM QEALKLLRER  60
KDRFDIVISE FNMPDMNGFE FLQHVSLQMD IPVIIMSSDG ETSRVMNVVE KGACDYLVKP  120
IRLKELRNIW QHVLRKRVQH VRDIEHPAEI QTSRNESGQP DTILGKKRKD FENKNHDREC  180
GDRSSVKKPR VIWSADLHQK FVKAVNLIGL DKAGPKKILE LMEVPWLKRE NVASHLQKYR  240
LNLSRMQKEK ELKAASGWIK RSDIFTKDVY FQHSVSQNVV TTENFVPGGL HIHDATICEG  300
NPSAILSTPV ALESNNTVFR DVIDPPISTT SGISFNQSFG PPDSKVHSQH IIQNQFTWSA  360
KVPSIQFQQQ LKPHYVIGEA ADIENAAAFF WGLQGNLTFN PDSSSTWTTM NHSSEQNLHD  420
NLLISDGFSS FVDIYAENPE LLDFESSNDF QAKNLSIPVE NLVIDPAHPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-105	ARR-B family protein