PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09589.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 153aa    MW: 18044.3 Da    PI: 8.4861
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.11.1e-2157145290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 fY +Y+++ GF+vr+ ++k+  ++  +++ ++vCs+ g+r++ k +++ +rr+r+etr+gC+a+++v  ++ dg ++vt+++l HnH+l 
  PIN09589.1  57 FYWNYGRQNGFDVRRCHKKTV-NDSLVKNVEWVCSRVGFRQPLKYEAKCKRRPREETRCGCEARFRVAHDQhDGLYKVTEFVLFHNHALE 145
                 9**************998877.8888******************************************9999****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MDEDKRKRQC YGNSVDDKSD RSLDAKGCVS LESNFLQLNP EKIGELVFNS PDKADWFYWN  60
YGRQNGFDVR RCHKKTVNDS LVKNVEWVCS RVGFRQPLKY EAKCKRRPRE ETRCGCEARF  120
RVAHDQHDGL YKVTEFVLFH NHALETSEIA HRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.16e-12FAR1 family protein