PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09668.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 791aa    MW: 85828.5 Da    PI: 5.9105
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.93.6e-1034307902374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v++L+++Ae v++g+  laq++Larl+++ sp g+p++R+a+y +eAL+  l+  s ++l    p++ ts+ + + ++ a+k fse+sP+++f+++t+N
  PIN09668.1 430 VDQLYKAAELVQTGNPVLAQEILARLNHQLSPIGKPFHRAAFYCKEALRLLLQTnSNNSLN---PSTVTSPFSLIFKIGAYKSFSEISPLIQFANFTCN 525
                 789*************************************************993333333...444444455************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qa+le +eg +r+Hi+Dfdi++G+QW++L+q+LasR++g+psl++T+++sp ++++ el  t+e+L +fA+e+++ fef+v+  ++l++   ++L ++ 
  PIN09668.1 526 QALLEVLEGFDRIHIVDFDIGYGGQWASLMQELASRSGGAPSLKVTALASPLTHDQLELGLTRENLIQFASEINIAFEFEVMSIDSLNSG-SWSLPFHA 623
                 *********************************************************************************866666665.78886666 PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                   +Ea+aVnl +     +  ++sl+     +L++vk+lsP++vv v++ +d+++ +F++++++al+ ys l++sl+a    + ++ +k+Er+l+++ ++
  PIN09668.1 624 peNEAVAVNLPVGSVANY--QLSLPL----ILRFVKQLSPRIVVSVDRGCDRTDLPFANHIIHALQSYSNLLESLDAV-NVNMDALQKIERFLVQPGLE 715
                 569*******99666555..666666....*********************************************665.4577999************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +vv+ + ++     e+ ++Wr+ + ++GF+p+++s+++++qa++++++++++g++ve+++ slvl+W++++Lvs+SaWr
  PIN09668.1 716 KVVMGRFRS----PEKTQHWRALFLSSGFSPLTFSNFTESQAECVIKRTPVRGFQVEKRQSSLVLCWQRKELVSASAWR 790
                 ***998877....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    
MKGIPLPFDF EGKGELDLEL VVKNRTFITD SSAALSSYFF KKNCFLNNNS FCEPTSVLDS  60
ARITSRPTSS STLSSSHGGG STGGGGGAAS TDTAGVAAVS DTNPSPKWQQ DSTTATSSNA  120
GGADSELLPV PQSLEIGNAG GGGGGNPEKF AMEDWESMLS ESVAVSPTQE QSILRWIMGD  180
VEDPAMGSLN KVLQFGSGGG GSAAPEFEFN GGFGAVDQGF GADQFGTTSF MSTLPSFPNN  240
NRSAGEKIGL VSNPLSSNLP INFKFSPNSQ NIMHSSSVSN NLGPIAFYHQ PAFDSSAEMK  300
PPIFNSQLLI NQHQAHYPQN PSFFFPLSYT QQQEQNIFGP PQAKSHNPGG PVDGGLEPGG  360
QIPKGSFTDT GQQELFMGRQ QLHLQQHPFP HQLQLLPHYL QQRPMGLGQK PKIGGGDELG  420
HCYQQQQAIV DQLYKAAELV QTGNPVLAQE ILARLNHQLS PIGKPFHRAA FYCKEALRLL  480
LQTNSNNSLN PSTVTSPFSL IFKIGAYKSF SEISPLIQFA NFTCNQALLE VLEGFDRIHI  540
VDFDIGYGGQ WASLMQELAS RSGGAPSLKV TALASPLTHD QLELGLTREN LIQFASEINI  600
AFEFEVMSID SLNSGSWSLP FHAPENEAVA VNLPVGSVAN YQLSLPLILR FVKQLSPRIV  660
VSVDRGCDRT DLPFANHIIH ALQSYSNLLE SLDAVNVNMD ALQKIERFLV QPGLEKVVMG  720
RFRSPEKTQH WRALFLSSGF SPLTFSNFTE SQAECVIKRT PVRGFQVEKR QSSLVLCWQR  780
KELVSASAWR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-144GRAS family protein