PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09698.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 221aa MW: 26097.4 Da PI: 7.4694

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.6	2.4e-12	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +++d++l+ +v+ +G g+W+ ++++ g+ R +k+c++rw +yl PIN09698.1 12 KGFWKPDDDLILKIYVETHGEGNWTVVSKKTGLMRGAKSCRLRWKNYL 59 688*******************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l PIN09698.1 65 RGMMSEDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6789****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MEGKEEKPRF KKGFWKPDDD LILKIYVETH GEGNWTVVSK KTGLMRGAKS CRLRWKNYLR 60 PNIKRGMMSE DEKDLIIRLH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRASRDQIT 120 HLDHINHRSH QTHQNEPQFS QHQDLQTASI PQVETDHSTV VDDSWVQDFN VTLPHDHQNY 180 PSPFFFQNYE AFMTPILDNL VLFDPFGTTS DELIMRETIF Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	1e-61	MYB family protein