PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09725.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 197aa MW: 22575.3 Da PI: 9.9412

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l++av G+++W Ia++ g++R++k+c++rw +yl PIN09725.1 23 RGPWTAEEDRRLAKAVDIDGPKQWPIIAAKSGLNRCAKSCRLRWMNYL 70 89********************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	76	121	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia++++ Rt++++k++w+ +l PIN09725.1 76 RGNISDQEEDLIIRLHKLLGNR-WSLIAARLP-SRTDNEIKNYWNYHL 121 78999***************.*****.*********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MAGATANASI KGKQRPPNKK LNRGPWTAEE DRRLAKAVDI DGPKQWPIIA AKSGLNRCAK 60 SCRLRWMNYL RPNIKRGNIS DQEEDLIIRL HKLLGNRWSL IAARLPSRTD NEIKNYWNYH 120 LRKKKLDKGF NDVGNSTRDM GSKNDHKNEE KNIRANSSNG GEEDEKATVD DVDDFFDFSN 180 ENPSTLEWVT KFLEYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-50	MYB family protein