PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09803.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 306aa MW: 34271.4 Da PI: 7.4407

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv++++++G g+W++ ++ g+ R++k+c++rw +yl PIN09803.1 14 KGPWTPEEDEKLVEYINKHGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49.2	1.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia+ ++ gRt++++k+ w+++l PIN09803.1 67 RGPFSPEEEKVVIQLHAILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MGRAPCCDKK GLKKGPWTPE EDEKLVEYIN KHGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF SPEEEKVVIQ LHAILGNRWA AIASQLPGRT DNEIKNLWNT HLRKRLLSMG 120 IDPQTHKPST SNETINRLPS SPSTRHMAQW ESARLEAEAR LSRESLLLVP SSIGKPEADY 180 FLRLWNSEVG ETFRMLKNGE KADSQGKLSS SSSTKSGSLS GTTTEMGPIA ADSSNQNDDT 240 RCYLKAGIDS CSSNELEEES SESTLQLLLD FPSNNDMSFL EHNDCYGLYP GFYTESCSYN 300 AYKNGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-114	MYB family protein