PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09832.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 254aa    MW: 28436.4 Da    PI: 4.4844
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.4e-172576155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+y+GV +++ +grW+A+I  ++    +k+ +lg++ t eeAa+a++ a+ +++g
  PIN09832.1 25 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYSTQEEAAAAYDMAAIEFRG 76
                89****99***********99644...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MQKLTKEEYL ASLRRQSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVCGNK YLYLGTYSTQ  60
EEAAAAYDMA AIEFRGPNAV TNFDISNYAN KLKKDLPDAQ VRQEEVQVKH EMNANPIPPN  120
KVQPDEAQDH QEDTNQVFVP KLETIDSIDS HGIVVMDPTE EHEHPWDLCL DIGFNILQVP  180
DIPLEQASEV FDYKGFEDDI ECIFDGPFDD GEFLMSGKAE ADDVLVAHRE LKGQDASTSP  240
SSSSVSTTSV CSNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.21e-51ERF family protein