PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09835.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 274aa    MW: 31679 Da    PI: 8.6817
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.82e-1843133199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv   + +l    + +p +f++++g++   ++ +tl+ +sg+sW+v +  ++  +  +++++W eFv++n L++ Df++F ++g+s f  +vk+f +
  PIN09835.1  43 FFKVY--KPALCAESMKIPPDFIKKFGQN--IPTSVTLRRQSGQSWQVDI--KRINDNWFFRECWPEFVQENSLEDDDFLTFCYIGNSVF--CVKIFTR 133
                 66777..444555569**********977..7778***************..777777789****************************9..***9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MAKRGRGRPR KIISDNLNDG PDRAQPTEKS DEKDSYSDEL PEFFKVYKPA LCAESMKIPP  60
DFIKKFGQNI PTSVTLRRQS GQSWQVDIKR INDNWFFREC WPEFVQENSL EDDDFLTFCY  120
IGNSVFCVKI FTRNGCIKRD DCTNGKPIEN LHGNEVSEHV YAGNYEENHA IGRNLSQETS  180
ITGKTMYRNL SFSVVLTRSY ICKGSLHSPR ECGRIYVTKC KDGPRTVTLW IKNNSWAVSL  240
IIIVDRLHFR RGWPKFVKDN SLQNGNLCIF KLID
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.16e-17B3 family protein