PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09883.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 324aa    MW: 35525.2 Da    PI: 9.8571
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-31253310359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+
  PIN09883.1 253 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGDHNHP 310
                 99************************988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAVELMPGYN FTAQMEENAA QEAAAAGLQS VEKLIILLSH SHQQNFQEPS SSAAAVADVA  60
VNKFKKFISL LDRSRTGHAR FRRGPVSTSQ PQKIEPVFEP VGPLSQPEKI DEKEPGSRIY  120
YPTPVQRLPP LPHHHQLVKT GSIERKESTK TINFASPANS FMSSLTGDTD SLQPSMSSGF  180
QITNLSQVSS AGRPPQSTSS FKRKCSSMDD GTAKCGAGSS GSRCHCPKKR KSRLKRVERV  240
PAISMKMADI PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RALDDPTMLI  300
VTYEGDHNHP HSNTDAPAVV LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-91WRKY family protein