PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09892.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 283aa    MW: 32355.8 Da    PI: 5.2011
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +++G+g+W++I+r+   ++t+ q+ s+ qky
       PIN09892.1 135 PWTEEEHQLFLMGLNKYGKGDWRSISRYYVITKTPTQVASHAQKY 179
                      8*****************************889***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEWPYSPLEE ESFYGLLSPH LEIENKSSQW TYEENKVFEN CLAEINPASP DFFEKVAAKI  60
PLKSIQQIKN HYQALLEDVE MIESGNFPMP DYSNQDSVDE NEKENDQMET KKYEGSPSEV  120
TKMRNNGGQR RRGVPWTEEE HQLFLMGLNK YGKGDWRSIS RYYVITKTPT QVASHAQKYF  180
RRQTSSTPID RRRPSIHDIQ TVNPTTTFAP SLPQISHENP SLSINPILNQ SFNGGIHAQQ  240
NPSFNLPMNP NFSSAEGSIF NQSGAGDFTT SFLLPSPRNQ QWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-53MYB family protein