PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09957.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 195aa    MW: 20415.5 Da    PI: 4.3543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-193485155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  PIN09957.1 34 PVYRGVRRRKSSGKWVSEIREP-----RtpNRIWLGTFPTPEMAAVAYDVAALALKG 85
                68*******************9.....4478***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSQSTGASGS GTSRSTQSPP SDSGAQSPSS GRHPVYRGVR RRKSSGKWVS EIREPRTPNR  60
IWLGTFPTPE MAAVAYDVAA LALKGNEAEL NFPNSASSLP VPASTSPRDI QAAAASAAAA  120
AGAAVDALGV RNSGTVETAV PDTEIPAAVN QEFVDEDLIF DMPNVLTNMA QGMMISPPRL  180
DSPDDDPNYS DNLWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-44ERF family protein