PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09961.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 406aa MW: 46492.5 Da PI: 5.2052

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.3e-53	25	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv + +++ i+evd++++ePw+Lp ++k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g PIN09961.1 25 LPPGFRFHPTDEELITFYLASKVFNGTFSG-VEIAEVDLNRCEPWQLPDAAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAsSGG 122 79***********************999.45***********8888999**********************************987788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+gekt+Wvmheyrl PIN09961.1 123 LLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 152 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MMMGMEEEIL CELEERDDEM NERGLPPGFR FHPTDEELIT FYLASKVFNG TFSGVEIAEV 60 DLNRCEPWQL PDAAKMGERE WYFFSLRDRK YPTGLRTNRA TGAGYWKATG KDREVYSASS 120 GGLLGMKKTL VFYKGRAPRG EKTKWVMHEY RLDGDFSCRH TAKEEWVICR IFHKIGEKKT 180 PTMLQEQSYL LKPSPFSTTT TNSNSLPPLL EPPPTLLETQ SQNQDYRHPP IMQITLNQNQ 240 NSFLVHTQEY SHDFKTLINP LVDPFLVNNS NLSSFTNKDS NILLKPFLSH EYQDLTTFKE 300 LSNAIAKQCK KEPNILQPPD VQIRSSTDGF GTMNMNMNMQ YWAERKIQDN SKYDQNPFLF 360 GSSGAADEMG IPSGTLVEGV DNINVNAIDA ADVDHVMSTE PAFKWW

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MMMGMEEEIL CELEERDDEM NERGLPPGFR FHPTDEELIT FYLASKVFNG TFSGVEIAEV  60
DLNRCEPWQL PDAAKMGERE WYFFSLRDRK YPTGLRTNRA TGAGYWKATG KDREVYSASS  120
GGLLGMKKTL VFYKGRAPRG EKTKWVMHEY RLDGDFSCRH TAKEEWVICR IFHKIGEKKT  180
PTMLQEQSYL LKPSPFSTTT TNSNSLPPLL EPPPTLLETQ SQNQDYRHPP IMQITLNQNQ  240
NSFLVHTQEY SHDFKTLINP LVDPFLVNNS NLSSFTNKDS NILLKPFLSH EYQDLTTFKE  300
LSNAIAKQCK KEPNILQPPD VQIRSSTDGF GTMNMNMNMQ YWAERKIQDN SKYDQNPFLF  360
GSSGAADEMG IPSGTLVEGV DNINVNAIDA ADVDHVMSTE PAFKWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	4e-98	NAC family protein