PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10068.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 327aa MW: 36453.7 Da PI: 6.6055

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.3e-13	152	197	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ + f L ++P + kK++K++iLe A++Y+k+L+ PIN10068.1 152 HIIAERKRREQLSQLFVALSAIVPGL-----KKMDKSSILEDAIKYLKHLK 197 899*********************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MDNSLFMDQH DFMDSLDEDF TAAFGQNLHN YMPTGTSSAM TNIPNSNSSY TSSAIEQAKP 60 HIPEDNFSKF SSIQNVMINP DDQVSSAPMI ISFGNQNNPS HNFQQVSTVN PMPTINPEEH 120 VVARNGVLKA LAKVQSTKKR TRVRAPSQTY DHIIAERKRR EQLSQLFVAL SAIVPGLKKM 180 DKSSILEDAI KYLKHLKERV QKLEEQAEQR AMESVVLVRK SQMVVEDEGS SDEQISGCFA 240 EQPLPAIEAR VCDKHILIRV HCEKKKGVLV KLLCKVESLN MIIVNTNATP FGNVSLDITI 300 IAELEKEFNM TVKEVVTAIR AALMPGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	160	KKRTRVRAPSQTYDHIIAERKRR
2	156	161	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-51	bHLH family protein