PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10078.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 324aa    MW: 36875.7 Da    PI: 4.3117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12157200654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++YIk+L
  PIN10078.1 157 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYIKEL 200
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEFYNMNEQG FLEEILGLRE MDFYCPNQDF SSNVFDGFSA CNNFDFDFPT NTCFEDYSVQ  60
MDQCYAPFGD ELSPPGFTSD SSNAKLEPQT FPYCQEDYYS MPVFEDEDGA LFGNLDVGAP  120
CKVEPLPELP TFNMGLSPES ERKNKVKKIN GQPSKNLMAE RRRRKRLNDR LSMLRSVVPK  180
ISKMDRTSIL GDTIDYIKEL LERINSLQEE MDVGTNELGF LSIFKDIAKP NEILIRNSPK  240
FEVERRNSDT RIDICCAGKP GLLLSTVSTL EALGMEIQQC VISCFNDFAM QASCSEEQKQ  300
RPILETEDIK QALFRNAGYG GRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160167ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-82bHLH family protein