PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10152.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 251aa MW: 28550.2 Da PI: 9.2362

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.6	1.6e-09	23	69	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT+eE +++ a +++ +W ++a++++ g++ +++ + ++ + PIN10152.1 23 RWTKEENKKFESALAMFDETtpnRWLKVAEMIP-GKSVYDVMNQYNEL 69 9***************99*********.********9975 PP
2	Myb_DNA-binding	40.4	7.1e-13	123	167	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W+ I+r + +t+ q+ s+ qky PIN10152.1 123 PWTQEEHRRFLLGLQKYGKGDWRNISRNFVISKTPTQVASHAQKY 167 8***************************789*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
METLCPTSLL SNPSRWLGQS STRWTKEENK KFESALAMFD ETTPNRWLKV AEMIPGKSVY 60 DVMNQYNELV ADVSDIEAGL VPIPGYGYLG LGSSPFTFEL QEDNLYRKRG RSSCDQERKK 120 GVPWTQEEHR RFLLGLQKYG KGDWRNISRN FVISKTPTQV ASHAQKYYLR QLTGGKDKRR 180 PSIHDITTVD LNDTQNNDKS CLLSDKSLQN PIITSPKVVF EDSSLVAYPH NVSRYILNVG 240 ASSPGFHRFH G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	120	RKRGRSSCDQERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	2e-82	MYB family protein