PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10155.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 233aa    MW: 25997.7 Da    PI: 5.0459
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-1996145355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +++g
  PIN10155.1  96 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 145
                 9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDLHSSVFQN SLNTDFSSDN SSFNSSEFDS KTFTKSLPFN ENDSQEMLLL DVLSEAGQET  60
SDSSSFDQQN LTKDNEEVNS SSEVGKFMKP TTERAYRGVR RRPWGKFAAE IRDSTRNGVR  120
VWLGTFDTAE AAALAYDQAA FAMRGQAAIL NFPVDRVRES LREMRCWTEA EQGCSPVMAL  180
KRKHSMRRRC GGGGGRKGKG GEVKVENVVV FEDLGADYLE QLLSSSSESK NPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-50ERF family protein