PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10176.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 350aa    MW: 37582.1 Da    PI: 8.6871
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.9e-21153202255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  PIN10176.1 153 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 202
                 8********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MQQQEQPDYL LSAVVAPPML PGYSQSREMS AMVTALTHVV SGQRHAAQIS SAATSSFAAG  60
GGVDSPSSAY SSSSSGSWAG QKRRRDQDDS VTQFPERVYR GFGESSSSVK PEPETGTSMT  120
TPTTTGATVA AEPPPQPESS APSHEETGER RRKYRGVRQR PWGKWAAEIR DPHKAARVWL  180
GTFDTAEAAA RAYDEAALRF RGNRAKLNFP ENVRILPPPQ PSQSTQIAAA NPPPPPATSP  240
SSLFQNVARD YWQYSQLLQS TGDFQPQQST SLFEQMFYAS SLAGLYSHTL NTSSSTSSSS  300
YPMMFSSGQT IHFAPQGNTQ QTQGGSGSGS TSNFPAPPWT SGHYPPSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149154ERRRKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-25ERF family protein