PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10192.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 330aa    MW: 36152.7 Da    PI: 4.6602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.51.5e-052752951030
                 HHHHHHHHHHHHHHHCTSCCC CS
         HLH  10 rrRRdriNsafeeLrellPka 30 
                 r+RR+riN+++  L+ l+P+ 
  PIN10192.1 275 RKRRERINERLRILQNLVPNG 295
                 9******************84 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEYLGSMSEG EWNSLNGMFS DEAEFMAQLL SNCSLPNEVQ NGSNFLVSSA FWQSNGNNSG  60
VDEGLMYSSD ETIASLCSFP QGSSSYESYN PSVSHQVYVT NNNMMTMDYN SAHIHILSTN  120
VMEGDDFLTQ DVSNDSMESN KSVSEDVIQG KNLPPGADLA IPTPEVRKEE KASSPLESKK  180
RSSVPGEVQR NKRNTKPKKC LKLDENDEDN NNNNNAVLHR QTSSSCCSED DSNVSHELNG  240
LASSSSSKGS GALNLSGKTR ASRGSATDPQ SLYARKRRER INERLRILQN LVPNGTKLLS  300
SDELWMYAPI AYNGMDIGLD LKISTPKAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-25bHLH family protein