PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10256.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 1104aa MW: 119838 Da PI: 6.9594

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	943	965	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cg + + ++ L rH+ H PIN10256.1 943 YQCGICGLRLKLQEPLDRHMEWH 965 9*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1104 aa Download sequence
MEMESTRRPF DRSLSISKEP GLKKPRLNEN HAAPDRSSNV RTGFIQRPMH SNSGGGSRVQ 60 RDQDSESNDS VRGPYQHQLG HQLHQELVDQ YMTALSELTF NSKPIITNLT IIAGENLHAA 120 KAIAATVCAN ILEVPREQKL PSLYLLDSIV KNIGRDYIKY FASRLPEVFC KAYRQVDSSI 180 HQGMRHLFGT WRGVFPLETL QMIEKELGFT STAAVSSSGV TASRPDSQAQ RPAHSIHVNP 240 KYLESRQQLQ TTRAKGSGSD ISGALVSSHE DVEALGRAAS IGSERSRADI YAKPIQHDHK 300 DRVNEPVFSD KSSSIPYLDR GYGSSLSGRS DLGSGRASEK FKEQGLDRPW YESGSGVTGK 360 VFNRKNGFDM KHGSESYAPH QSANSDSLLQ LKQNFVSRSA NGVGRSWKNS EEEEYIWDQM 420 NTRPNDRVAA DISAENDWTP DSYEKLDVVS HVRRRQSIHD IAPGVDDEAS TDSISTGVGQ 480 VASGNQVPLS WSEEQHRPEG RMLLGPDGNV SGYSEGYSGG RKSSASTVGR TALPPQQGAA 540 SIVGLDFKFS ANVMPRPTLP MTQPRQTLGT ASSPMESAMH QCPPSPSLSA HNPNRPLKNF 600 AERNQASTGF HPDPRRPPRL RNTGSSDYFS QDSPPLLSRD VYQSSTQRFL PQSLQTSSTV 660 MPSLQQRKYV PSGKQRKLEV SDFGSTGDGQ HLSLSQISGS ESRSTIENSS SDLSSPNTVD 720 SPGKSITNSL STAGVKSGTL GSSSSLGSSN NPGFQEVGLG SSLGAVPPPL PSGAPPVTSR 780 PLHGKTQLPG FSQKKLEQPS LAPGRSLSSL AGTGLEQTPS TVVSTSNPVS SLISSLVAKG 840 LISASKSDTA SSASIQCINQ PLDKGPEVSS TNSTPDSSVP VTMGRSPLST TDGVSSSKPD 900 AKASDSLQST RKIKNLIGFE FRPDVVRKLQ TDVVTDLFSD LPYQCGICGL RLKLQEPLDR 960 HMEWHALRAP GENPSNKNSR RWYSNSVDWV AGVGCLRTAD NTSEMSRESG EALESAGQMV 1020 PADENHCACI LCGELFEDFY SQERGEWMFR GAVYLIPSPE SHEMVETTSF FTGSWSPIVH 1080 VDCMSEDSVW DLGLAFDVKL EKDR

Sequence ? help Back to Top

Protein Sequence Length: 1104 aa Download sequence

MEMESTRRPF DRSLSISKEP GLKKPRLNEN HAAPDRSSNV RTGFIQRPMH SNSGGGSRVQ  60
RDQDSESNDS VRGPYQHQLG HQLHQELVDQ YMTALSELTF NSKPIITNLT IIAGENLHAA  120
KAIAATVCAN ILEVPREQKL PSLYLLDSIV KNIGRDYIKY FASRLPEVFC KAYRQVDSSI  180
HQGMRHLFGT WRGVFPLETL QMIEKELGFT STAAVSSSGV TASRPDSQAQ RPAHSIHVNP  240
KYLESRQQLQ TTRAKGSGSD ISGALVSSHE DVEALGRAAS IGSERSRADI YAKPIQHDHK  300
DRVNEPVFSD KSSSIPYLDR GYGSSLSGRS DLGSGRASEK FKEQGLDRPW YESGSGVTGK  360
VFNRKNGFDM KHGSESYAPH QSANSDSLLQ LKQNFVSRSA NGVGRSWKNS EEEEYIWDQM  420
NTRPNDRVAA DISAENDWTP DSYEKLDVVS HVRRRQSIHD IAPGVDDEAS TDSISTGVGQ  480
VASGNQVPLS WSEEQHRPEG RMLLGPDGNV SGYSEGYSGG RKSSASTVGR TALPPQQGAA  540
SIVGLDFKFS ANVMPRPTLP MTQPRQTLGT ASSPMESAMH QCPPSPSLSA HNPNRPLKNF  600
AERNQASTGF HPDPRRPPRL RNTGSSDYFS QDSPPLLSRD VYQSSTQRFL PQSLQTSSTV  660
MPSLQQRKYV PSGKQRKLEV SDFGSTGDGQ HLSLSQISGS ESRSTIENSS SDLSSPNTVD  720
SPGKSITNSL STAGVKSGTL GSSSSLGSSN NPGFQEVGLG SSLGAVPPPL PSGAPPVTSR  780
PLHGKTQLPG FSQKKLEQPS LAPGRSLSSL AGTGLEQTPS TVVSTSNPVS SLISSLVAKG  840
LISASKSDTA SSASIQCINQ PLDKGPEVSS TNSTPDSSVP VTMGRSPLST TDGVSSSKPD  900
AKASDSLQST RKIKNLIGFE FRPDVVRKLQ TDVVTDLFSD LPYQCGICGL RLKLQEPLDR  960
HMEWHALRAP GENPSNKNSR RWYSNSVDWV AGVGCLRTAD NTSEMSRESG EALESAGQMV  1020
PADENHCACI LCGELFEDFY SQERGEWMFR GAVYLIPSPE SHEMVETTSF FTGSWSPIVH  1080
VDCMSEDSVW DLGLAFDVKL EKDR