PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10257.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 139aa    MW: 15802.8 Da    PI: 5.1312
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind80.13.5e-2577135260
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                   Fl+k+y++++d++l+ +isw e+g+sfvv+d+ efa+ +Lp+ Fkh+nf+SFvRQLn+Y
    PIN10257.1  77 FLSKTYDLVDDPSLDYIISWGEKGDSFVVWDPVEFARMILPRNFKHNNFSSFVRQLNTY 135
                   9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MASNDNQILF PSPNPSPDRK AFLPPQSFPL SPFSSFDSFQ SQFEFKAGVK SKPESMESLS  60
GVPRPMESLH ETPIPPFLSK TYDLVDDPSL DYIISWGEKG DSFVVWDPVE FARMILPRNF  120
KHNNFSSFVR QLNTYVGIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-36HSF family protein