PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10261.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WOX
Protein Properties Length: 243aa    MW: 28176.4 Da    PI: 8.2711
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.53.6e-211473357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++tkeq+  Le+l+++  r+psae++++++++l    +++ ++V++WFqN++a++++
  PIN10261.1 14 SRWNPTKEQISMLESLYRQgLRTPSAEQIQQITNRLreygHIEGKNVFYWFQNHKARQRQ 73
                6*****************99**************************************97 PP
2Wus_type_Homeobox115.82e-371475465
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +RW+Pt+eQi +Le+ly++GlrtP++e+iq+it++L+eyG+ie+kNVfyWFQN+kaR+rqkq
         PIN10261.1 14 SRWNPTKEQISMLESLYRQGLRTPSAEQIQQITNRLREYGHIEGKNVFYWFQNHKARQRQKQ 75
                       8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEGGDQTSVG NGGSRWNPTK EQISMLESLY RQGLRTPSAE QIQQITNRLR EYGHIEGKNV  60
FYWFQNHKAR QRQKQKQEMN LAYFNRLMHS TSAFPPPHQN VICSPCCITP PRNDPLGLIY  120
QQQQYPKVPL PSMGAFKRTK LIQESTITDT RYNKSMHDDQ YSRRKNPHQE TLDLFPIHPT  180
GLLLESRNGN IENNNYDQNI AEQNKKKNPN FCSDQNIYYC STSPSCSDED QPFFDFFCGN  240
NGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.11e-50WOX family protein