PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10303.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 210aa MW: 24644.8 Da PI: 5.5026

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ede+l+ +v++lG ++W++ a+ g++R++k+c++rw +yl PIN10303.1 8 KGPWLEDEDEKLAAVVALLGERRWDSLAKASGLRRSGKSCRLRWMNYL 55 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.7e-17	62	105	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+ ++eE++ +++++k++G++ W++Ia++++ gRt++++k++w++y PIN10303.1 62 GKISKEEEKVIIELHKKWGNK-WSRIAQRLP-GRTDNEIKNYWRSY 105 6789***************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MQEVELRKGP WLEDEDEKLA AVVALLGERR WDSLAKASGL RRSGKSCRLR WMNYLRPNLK 60 HGKISKEEEK VIIELHKKWG NKWSRIAQRL PGRTDNEIKN YWRSYSKKKA VVLEKECLSS 120 SVNTPCSISD ESFLIKDDVL GLSDDASDAL EPLNWTRSPY ETRLSEWMSN WPPDTRKTDK 180 LWDYEVYSSQ WIFDECNIGT WDDLSLWDGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	6e-52	MYB family protein