PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10311.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 157aa    MW: 18255.2 Da    PI: 6.3406
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.62e-1370143275
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgk 75 
                 fY +Y++++GF++r+ ++k+  ++  +++r++vCs+ g+ +++ ++++++rr+++et+ gC a + v  +  dg 
  PIN10311.1  70 FYLTYGRDMGFDIRRCHKKTI-DSWLVKNREWVCSRAGYWKDRGNNQRQNRRPKSETQYGCPAAFWVAHDIvDGL 143
                 9**************998777.7777*************************************999887654555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MTSSLVKNDE PYNNIQYDNN GFNDEAPRSC RSESTTNPNE ALTSITNCMV PDFETITQLV  60
FESDLDADLF YLTYGRDMGF DIRRCHKKTI DSWLVKNREW VCSRAGYWKD RGNNQRQNRR  120
PKSETQYGCP AAFWVAHDIV DGLYKSHTLH HFTTIPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.15e-09FAR1 family protein