PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10373.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 291aa    MW: 32919.7 Da    PI: 6.6165
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151763248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g+W++ Ed++l++ ++++G  +W++ ++  g+ R++k+c++rw +yl
       PIN10373.1 17 GPWSPAEDLRLINFIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63
                     79*****************************99************97 PP
2Myb_DNA-binding476.1e-1569114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T++E++ +++++   G++ W++Ia +++ gRt++++k+ w+++l
       PIN10373.1  69 RGDFTPQEEQTIINLHGSIGNK-WSKIATHLP-GRTDNEIKNVWNTHL 114
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGKGRAPCCD KSKVRAGPWS PAEDLRLINF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG DFTPQEEQTI INLHGSIGNK WSKIATHLPG RTDNEIKNVW NTHLKKKLLT  120
GKRTSVDNCN QTQAKHWKTD CSASSSCASS SITFDSPSTS CASSLSNRTN EASEYSKPDA  180
TNPRLNLDDE NIIIPPNFDI DFWEFLESLD PLLKSTRTEQ NGVNQDFNDV PITAENVNSQ  240
EVELRRSLSY LEKELGLTSD DGDNLLFKDQ EMNLDAEMIC SHSWEWVYSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.16e-72MYB family protein