PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10374.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 101aa    MW: 11533.4 Da    PI: 10.7495
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.1e-161763248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g+W++ Ed++lv+ ++++G  +W++ ++  g+ R++k+c++rw +yl
       PIN10374.1 17 GPWSPAEDLRLVNFIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63
                     89*****************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MGKGRAPCCD KSKVRAGPWS PAEDLRLVNF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG HFTPEEEQTI INLHNSIGNK YITLNSLLKT P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.11e-53MYB family protein