PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10431.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 387aa MW: 43100.2 Da PI: 7.0397

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.1	5.3e-17	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +p ++e++++ +l ++ +++V++WFqNr+ + k+ PIN10431.1 57 KPRWNPRPEQIRILESIFNSgMVNPPRDEIRKIRVQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.1	6.2e-36	56	119	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++kq PIN10431.1 56 PKPRWNPRPEQIRILESIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHKQ 119 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MASSNRHWPS MFKSKPCNTT HHQWQNDHIN SSLLSNGCHR TPYSSGPECE ERTPEPKPRW 60 NPRPEQIRIL ESIFNSGMVN PPRDEIRKIR VQLQEYGQVG DANVFYWFQN RKSRSKHKQR 120 QLKSQQPQTT APPPITTTIA TTFTTAPSSS SSSDKSSPNN SSEKSSLPTI VIDLLNSPTA 180 SVNQPFFQGS SEFLSEPFFF PSAGGSNSAN LTQGFCFPDM GNVADQSVFS ELMLMTHCSS 240 KKDEDAKMKL QPYLSYPVTT TPNTAQTSPP PPPLSVPSAN NHNFQGAGET GPTKTVVFIN 300 DVCFEVGVGP VNVREAFGDD AVLIESSSGQ PVLTNEWGIT MQPLQHGAFY YLLRPFAPSL 360 PDDRTMDLVI SLHFYPFYSC FFKFRVD

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MASSNRHWPS MFKSKPCNTT HHQWQNDHIN SSLLSNGCHR TPYSSGPECE ERTPEPKPRW  60
NPRPEQIRIL ESIFNSGMVN PPRDEIRKIR VQLQEYGQVG DANVFYWFQN RKSRSKHKQR  120
QLKSQQPQTT APPPITTTIA TTFTTAPSSS SSSDKSSPNN SSEKSSLPTI VIDLLNSPTA  180
SVNQPFFQGS SEFLSEPFFF PSAGGSNSAN LTQGFCFPDM GNVADQSVFS ELMLMTHCSS  240
KKDEDAKMKL QPYLSYPVTT TPNTAQTSPP PPPLSVPSAN NHNFQGAGET GPTKTVVFIN  300
DVCFEVGVGP VNVREAFGDD AVLIESSSGQ PVLTNEWGIT MQPLQHGAFY YLLRPFAPSL  360
PDDRTMDLVI SLHFYPFYSC FFKFRVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	4e-59	WOX family protein