PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10494.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 241aa    MW: 27974.1 Da    PI: 8.8381
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.53.8e-47121383128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 
                 pGfrFhPt+eel+++yL++ v gkkl+  +vi  ++iy+++P++Lp  +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+dk++ls+   ++ 
  PIN10494.1  12 PGFRFHPTEEELLDFYLRNMVFGKKLRG-NVIGLLNIYNYDPRELPGLAKIGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDKKILSSsdPKKM 109
                 9*************************99.99***************8888899**************************************98766778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  glkktLvfy+grap+g+ktdWvm+eyrl
  PIN10494.1 110 LGLKKTLVFYEGRAPRGRKTDWVMNEYRL 138
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDDSSTSQLE LPGFRFHPTE EELLDFYLRN MVFGKKLRGN VIGLLNIYNY DPRELPGLAK  60
IGEREWYFFV PRDRKHGTGG RPNRTTEKGF WKATGSDKKI LSSSDPKKML GLKKTLVFYE  120
GRAPRGRKTD WVMNEYRLPD SCSLPKDIVL CKIYMKATSL KVLEQRATRE EEIKTYPSPT  180
TPPVDSDSFF NQFGDTWTCN SIILPKGREN LTELQMPKFT MDWSQDSFWT LENLTPFLPM  240
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.16e-95NAC family protein