PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10561.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 468aa MW: 52116.6 Da PI: 8.1107

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	218	277	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ PIN10561.1 218 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 277 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MKIDLSLKLD ARDQEIMKKP EKVLVEGDEY SKPQEADPNS LDDEKKLKTE ELSSLQQRMN 60 QMKEENKILR SAVEKTMKEY SDLKAKFSIM QQNPHNKDPN IIFSLIGNHN DNMTSDDRQE 120 GTNTSATRRN PDLRQEISND KNMKDDDIDG LGLSLRLQSG SDKVDKNKDE RMGLVNRPIQ 180 SQIPSNYSLP AGIMSNISSP PNKRARVSVR ARCEAATMND GCQWRKYGQK IAKGNPCPRA 240 YYRCTVAPGC PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTTT AAASFMLLDS 300 NNPVLVDNRV LPTSLDHVNF PYLNNMNPSS PYIRTLNPSY HDPSKGIVLD LTNTPTSSNP 360 ISQLGHSWMP NYKQGNFNGN TLVNQLFPGP NRLVEENMSA IASDPKFRVA VAAAISSIIN 420 KESQTSPSPA AAKLVPTYGE NENGNRKDST WVLESGDPIR QSPQRDLN

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MKIDLSLKLD ARDQEIMKKP EKVLVEGDEY SKPQEADPNS LDDEKKLKTE ELSSLQQRMN  60
QMKEENKILR SAVEKTMKEY SDLKAKFSIM QQNPHNKDPN IIFSLIGNHN DNMTSDDRQE  120
GTNTSATRRN PDLRQEISND KNMKDDDIDG LGLSLRLQSG SDKVDKNKDE RMGLVNRPIQ  180
SQIPSNYSLP AGIMSNISSP PNKRARVSVR ARCEAATMND GCQWRKYGQK IAKGNPCPRA  240
YYRCTVAPGC PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTTT AAASFMLLDS  300
NNPVLVDNRV LPTSLDHVNF PYLNNMNPSS PYIRTLNPSY HDPSKGIVLD LTNTPTSSNP  360
ISQLGHSWMP NYKQGNFNGN TLVNQLFPGP NRLVEENMSA IASDPKFRVA VAAAISSIIN  420
KESQTSPSPA AAKLVPTYGE NENGNRKDST WVLESGDPIR QSPQRDLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-65	WRKY family protein