PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10663.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GATA

Protein Properties

Length: 250aa MW: 27315.2 Da PI: 6.5785

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	55.8	6.1e-18	138	172	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l PIN10663.1 138 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 172 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MESNQEVYQN GYCAAEFTPE NAKNGDHFII EDLLDLPNDE SMAAADGGFE SVMTDSAVTA 60 VDTSCNSTFS AGSLADPHFQ AADFGGPSGS AAGGQFSGEL SVPVQSDISA VGKKSPKSAV 120 QKKREGSDNS GGSEGRRCLH CATDKTPQWR TGPMGPKTLC NACGVRYKSG RLVPEYRPAA 180 SPTFVLTKHS NSHRKVLELR RQKELQRAQQ QQQQLFLHHH HYQQNMMFDA SNGEDYLIHQ 240 HIGPDFRQLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25830.1	1e-55	GATA family protein