PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10667.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 233aa    MW: 24901.6 Da    PI: 4.6326
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-1953103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PIN10667.1  53 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 103
                 68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNSEAHNSEL SSFSSSYSLS QNQESSTVEP PETAKKIKRI RDVNGGGGAT KHPVYRGVRM  60
RSWGKWVSEI REPRKKSRIW LGTFPTPEMA ARAHDVAALS IKGASAILNF PELANSLPRP  120
VSLSPRDVQA AAAKAAAMEK FDVLSSSSST SSSSSSSIDL STASEELTEI VELPSLGSCF  180
DSPELSNDFV YIDNAVEEGW LDPPPPWGGG GGGGDVADDG GISSFFETLL WNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-61ERF family protein