PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10710.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 615aa MW: 72809.6 Da PI: 8.2768

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.1e-18	28	116	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+ GFs+rk+ + + r++e ++f Cs+ ++e++++++ ++++ +t+Cka+l++ +ek g+w+vt+ eHnHe++ PIN10710.1 28 LYCDYAHVKGFSIRKEDQCYFPRSNELQAKEFECSCRDVKDERRSHNRIPVYQKPTIKTKCKARLRIGREKGGEWKVTRYMMEHNHEMV 116 59*****************999**********99999999788889*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MTNLIIDKLE IRLAVGQVVK TVEDAYFLYC DYAHVKGFSI RKEDQCYFPR SNELQAKEFE 60 CSCRDVKDER RSHNRIPVYQ KPTIKTKCKA RLRIGREKGG EWKVTRYMME HNHEMVEADQ 120 IYLLRSSRNL SNAQKSILEA MVNAGVSIAS AVSYMEEKAH GPENLIFTRK DAYDYIRSLK 180 RHTKAENGDS NNEPYFYWDM QLDDDNRVMN FFFKDYQCRI DYESFGDIQY LICALFVGIN 240 HRKQNVMFGL TFMLDKTESF EWLFRTFLES MSGKKPETLF TNQCQAMINA IDTVFPHTHH 300 RLCQWHINQY APLYFGDLNC DSRFKQLWNK CMTYCDSKEE FEEMWKHTID EYNLSDHKWL 360 NCMYKLRHKW ATAFCNMRFS TGLLATFRIE DTRCWHGKPP MIVKNHLLLM HASNVYTMNL 420 YKLFEIELVE SLSTEFAEDP SFVGPFFILF KVKSLYQYSR IRNVWLDKQK NEVKCSCHKF 480 KSMGILCKHA LKVLNHVTVH SIPEQYIKKR WMRTIKNRVS DIRSRSGTES QNETCHASEM 540 VFVNHSMRSF YDIIAQCKHH EKKAIALLEN LSSNDLHACD DVVVDEKNCQ LNEMLVRDCF 600 FVKSRGLTNA HIPRH

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MTNLIIDKLE IRLAVGQVVK TVEDAYFLYC DYAHVKGFSI RKEDQCYFPR SNELQAKEFE  60
CSCRDVKDER RSHNRIPVYQ KPTIKTKCKA RLRIGREKGG EWKVTRYMME HNHEMVEADQ  120
IYLLRSSRNL SNAQKSILEA MVNAGVSIAS AVSYMEEKAH GPENLIFTRK DAYDYIRSLK  180
RHTKAENGDS NNEPYFYWDM QLDDDNRVMN FFFKDYQCRI DYESFGDIQY LICALFVGIN  240
HRKQNVMFGL TFMLDKTESF EWLFRTFLES MSGKKPETLF TNQCQAMINA IDTVFPHTHH  300
RLCQWHINQY APLYFGDLNC DSRFKQLWNK CMTYCDSKEE FEEMWKHTID EYNLSDHKWL  360
NCMYKLRHKW ATAFCNMRFS TGLLATFRIE DTRCWHGKPP MIVKNHLLLM HASNVYTMNL  420
YKLFEIELVE SLSTEFAEDP SFVGPFFILF KVKSLYQYSR IRNVWLDKQK NEVKCSCHKF  480
KSMGILCKHA LKVLNHVTVH SIPEQYIKKR WMRTIKNRVS DIRSRSGTES QNETCHASEM  540
VFVNHSMRSF YDIIAQCKHH EKKAIALLEN LSSNDLHACD DVVVDEKNCQ LNEMLVRDCF  600
FVKSRGLTNA HIPRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-61	FAR1 family protein