PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10750.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 784aa    MW: 84901.6 Da    PI: 6.1243
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS328.11.7e-1004267832374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L+++Ae ++ g+  laq +Larl++++sp g+p+qR+a+y +eAL+  l+       + ++p +++    + ++ a+k fse+sP+++f+++t Nq
  PIN10750.1 426 IDQLYKAAELIQMGNSVLAQGILARLNHHVSPVGKPFQRAAFYCKEALRMLLQT----NNDNMNPFTSP-FGLIYKIGAYKSFSEISPLVQFANFTSNQ 519
                 689*************************************************99....44555565554.56999************************ PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL..rvk 197
                 a+le +eg +r+Hi+Dfdi++G+QW++L+q+L+ R++g+p l+iT+++sp ++++ el  t+e+L +fA+e+++ fef+v+  ++l++   ++L  +v 
  PIN10750.1 520 ALLEVLEGFSRIHIVDFDIGYGGQWASLMQELSLRSGGSPLLKITALASPLTHDQLELTITRENLIQFASEINIGFEFDVISIDSLNSG-SWSLpfHVL 617
                 ********************************************************************************977777766.566633777 PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++Ea+aVn+ +   + +  ++s++     vL+++k+lsPk++v v++ +d+++ +F++++++al+ ys l++sl+a    + ++ +k+Er+ll++ +++
  PIN10750.1 618 EDEAVAVNFPIGCLTNY--QLSVP----LVLRFIKQLSPKIIVSVDRGCDRTDLPFANHIIHALQSYSNLLESLDAV-NINMDALQKIERFLLQPGLEK 709
                 7**********888777..44444....5*********************************************766.5688999************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +v  +  +     e+ ++Wr  + ++GF+pv++s+++++qa++++++++++g++ve+++ slvl+W++++Lvs+S+Wr
  PIN10750.1 710 IVKGRFHS----PEKSQHWRTLFLSSGFSPVTFSNFTESQAECVVKRTPFRGFEVEKRQSSLVLCWQRKELVSASVWR 783
                 **876655....*****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 784 aa     Download sequence    
MKGMPLPFDF EGKGVLDLEL VVKNRGFTIT DSNPVISSYF LKKNCLLNNS FGEPTSVLDS  60
PRIASRPTSS STLSSSHGGG GGSTGGGGGG AASTDTAGAA AVSDSNPSPK WQQDSTTATS  120
SNAGGADSGL LPVPPSLEIG ASADGGDGGN TEKCAMDDWE NVLSESVAAS PSQEQNIFRW  180
IMGDVEDPAM GSLNKVLQIG GGSGGGSAAS EFEFSGGFGA VDQGFTGDQL GPNFLPVPNN  240
TRSTAEKIDV VSNPLSSNLP NNFKFPPISH NFMNPSSVSN HLGAIPLHHL STIDSSAEIK  300
PPIFNPQLLI NQHQSQHPQN PSFFLPFSNA QQQEQSVFLP PAAKRHNPGG LIGGVFDPRG  360
QMPKGSFLDT GQQEMSVGRQ QLHHHQQQLQ LLPHYLQQRP TGPVPKAKMD GGDELGPNHQ  420
QQQAIIDQLY KAAELIQMGN SVLAQGILAR LNHHVSPVGK PFQRAAFYCK EALRMLLQTN  480
NDNMNPFTSP FGLIYKIGAY KSFSEISPLV QFANFTSNQA LLEVLEGFSR IHIVDFDIGY  540
GGQWASLMQE LSLRSGGSPL LKITALASPL THDQLELTIT RENLIQFASE INIGFEFDVI  600
SIDSLNSGSW SLPFHVLEDE AVAVNFPIGC LTNYQLSVPL VLRFIKQLSP KIIVSVDRGC  660
DRTDLPFANH IIHALQSYSN LLESLDAVNI NMDALQKIER FLLQPGLEKI VKGRFHSPEK  720
SQHWRTLFLS SGFSPVTFSN FTESQAECVV KRTPFRGFEV EKRQSSLVLC WQRKELVSAS  780
VWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-142GRAS family protein