PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10759.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 278aa    MW: 30478.4 Da    PI: 6.319
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.8e-05214236123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp+C k+F +   L  H r+H
  PIN10759.1 214 FECPYCQKVFASGQALGGHKRSH 236
                 89*****************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MMNSCALKSS SNEEQEQLYE AYNASKQEQI HSYSSSSSSD DDEEEKQENQ KKSAVDSGHS  60
TATGSTVLED GGSEEVPSKD SCRVFKRARN SKTQMNKTNE HSTSLSSISE LTPEENGAYI  120
LMMLSRDSWD RVGKRDKEIE LPKIKKNDNS QDSIVVKNSK VKGKYKCESC NMFFKSYQAL  180
GGHNAKHKRI EEATAAAAAV AGQSTAAAAE EKTFECPYCQ KVFASGQALG GHKRSHFSYG  240
TLGPILRNGE KLESKLNRQL SASHDQTSES ESSAASDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.17e-27C2H2 family protein