PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10778.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 236aa MW: 27454.9 Da PI: 5.4394

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	85.7	4.1e-27	85	183	1	88
EEEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrs 88 f+k+ltpsdv+k++rlv+pkkfa + + + + +++l ++d++ W+++++y+k+s+++v+t+GW++Fvk++gL+++D++ F+ +++r+ PIN10778.1 85 FQKELTPSDVGKLNRLVIPKKFAVKQfpnvpdqnmkDDERQDEVQLEFYDRQMILWKFRYCYWKSSQSFVFTRGWNRFVKEKGLRANDTIAFYmYESRD 183 99*******************9999999875555577899999*****************************************9443433 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MAYDSAAIKL RSGDCHRNFP WTNISIQEPK FQSHFTTDAV LSMIRDGSYP SKFADFLRSQ 60 QGELEIGLNL SSIHGDGDYS CTLLFQKELT PSDVGKLNRL VIPKKFAVKQ FPNVPDQNMK 120 DDERQDEVQL EFYDRQMILW KFRYCYWKSS QSFVFTRGWN RFVKEKGLRA NDTIAFYMYE 180 SRDKRQVGQS FLVIDVATKM EIDLGRNNEC DAVKEDEELG DQNDTKGFKL FGVQID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50680.1	9e-73	RAV family protein