PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10828.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 850aa MW: 94105.2 Da PI: 6.9493

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	332	431	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv++ PIN10828.1 332 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDVKGKEWVFQFRFwpNNNSRMYVLE-GITPCIQSMQLQAGDVVTFSRMH-PEGKLVMG 428 89************************666677788***********99899999999.*******************887.88888888 PP EE- CS B3 96 vfr 98 ++ PIN10828.1 429 GRK 431 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
MNVMSSTEAC FNSNCKEGSD KWRRGWRRRT GEYANLCDRC ASAYEDGKFC ETFHLNASGW 60 RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CLTCAKKSYI LTPNPAWPPP SHFLPSQPER 120 MKDLSVKTWN AVAGSGPVPW RQAPSLFSGS DIQSNVQPRM PFEVDVSGSI DRYRISERLS 180 TASPEMKQER SYERLVNGKL RLGPADTLQN GNAGFSMKEH SSPFVNDFKP LFQKNDSSSN 240 LNLATASSSK IEADNTQVPA PLSQQPVVSI PVDKQVCHSG MDSSAEAQMR NGKARGEGRG 300 RNQLLPRYRP QITDEELQKI SNDSKSVIIP LFEKMLSASD AGRIGRLVLP KKCAEAYFPS 360 ISQPEGLPLK VQDVKGKEWV FQFRFWPNNN SRMYVLEGIT PCIQSMQLQA GDVVTFSRMH 420 PEGKLVMGGR KASAISSSDQ GDEVTIIGTD ALASGDGSAR HKSGDVISAN GHMKEKMLED 480 KPVLYGKRKN SNCGVKSKRL RIENEDMIEL KITWKEAQGL MRPPAKIVPS FFVVEGCEFE 540 EFEEVAPVIG RPTIPGTDHF GEKVQWVQCE DCFKWRKVPA HALLPSRWVC SKNVGDPERS 600 LCSAAEELTK ELLEDMLPSM NKDPSKKEEI TEQETDLFAA LDGLDTLADL AIQGEGEDLA 660 SSENRTKHPR HKPGCACIVC LQPPSGKGSK HKQSCDCVVC SSLKRRFRTL MERREKKQSG 720 KEAESSSQNL NWQPIPENVQ NTDTSPDTNV GNGNVNQEEA GEWSYLDKLN GRKSSISPLK 780 GQIDLNIQPD REEELSPSSL PGSTDRFFRQ QKSLGSDIEN LVGKETQQEG IGGANFINCM 840 ALDGSNQKTG

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

MNVMSSTEAC FNSNCKEGSD KWRRGWRRRT GEYANLCDRC ASAYEDGKFC ETFHLNASGW  60
RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CLTCAKKSYI LTPNPAWPPP SHFLPSQPER  120
MKDLSVKTWN AVAGSGPVPW RQAPSLFSGS DIQSNVQPRM PFEVDVSGSI DRYRISERLS  180
TASPEMKQER SYERLVNGKL RLGPADTLQN GNAGFSMKEH SSPFVNDFKP LFQKNDSSSN  240
LNLATASSSK IEADNTQVPA PLSQQPVVSI PVDKQVCHSG MDSSAEAQMR NGKARGEGRG  300
RNQLLPRYRP QITDEELQKI SNDSKSVIIP LFEKMLSASD AGRIGRLVLP KKCAEAYFPS  360
ISQPEGLPLK VQDVKGKEWV FQFRFWPNNN SRMYVLEGIT PCIQSMQLQA GDVVTFSRMH  420
PEGKLVMGGR KASAISSSDQ GDEVTIIGTD ALASGDGSAR HKSGDVISAN GHMKEKMLED  480
KPVLYGKRKN SNCGVKSKRL RIENEDMIEL KITWKEAQGL MRPPAKIVPS FFVVEGCEFE  540
EFEEVAPVIG RPTIPGTDHF GEKVQWVQCE DCFKWRKVPA HALLPSRWVC SKNVGDPERS  600
LCSAAEELTK ELLEDMLPSM NKDPSKKEEI TEQETDLFAA LDGLDTLADL AIQGEGEDLA  660
SSENRTKHPR HKPGCACIVC LQPPSGKGSK HKQSCDCVVC SSLKRRFRTL MERREKKQSG  720
KEAESSSQNL NWQPIPENVQ NTDTSPDTNV GNGNVNQEEA GEWSYLDKLN GRKSSISPLK  780
GQIDLNIQPD REEELSPSSL PGSTDRFFRQ QKSLGSDIEN LVGKETQQEG IGGANFINCM  840
ALDGSNQKTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-151	B3 family protein