PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10931.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 244aa    MW: 26293.8 Da    PI: 4.3853
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.1e-184191155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr +k +g++v+eIr p   + +  r++lg+++tae+Aa+a +aa  +l+g
  PIN10931.1 41 CKYKGVRKRK-WGKFVSEIRLP---N-CrERIWLGSYDTAEKAARAFDAALFCLRG 91
                79*****999.**********8...3.45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MVKSPEKQLS SSAAASSLQV VREAAASSSS SSSSPSTSSS CKYKGVRKRK WGKFVSEIRL  60
PNCRERIWLG SYDTAEKAAR AFDAALFCLR GRNAKFNFPG NPPDIVNGGS MTPAEIQAAA  120
ARFAHASSDP PAAGPSGRFD NLDSQSDSLS SSEVLQHAES PCPSVSYGAA QLDNEVTEIP  180
LDNAFLDQFL NMGTENNVQD FGLFPGFDDF SGDFMSPLLP NGNADYWQDN SDEMSSEDPF  240
LWSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14450KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-47ERF family protein