PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10934.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 317aa    MW: 34142.9 Da    PI: 4.5453
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.73.3e-37221132102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g++ ll++i+
    PIN10934.1  22 FLTKTYQLVDDPSIDDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFHKVVPDR---------WEFSNDCFKRGERALLKDIQ 109
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PIN10934.1 110 RRKI 113
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSGESMAEGG GGDSQRKVPT PFLTKTYQLV DDPSIDDLIS WNEDGTTFIV WRPAEFARDL  60
LPKYFKHNNF SSFVRQLNTY GFHKVVPDRW EFSNDCFKRG ERALLKDIQR RKISSTVAVA  120
ATTAVAANAQ AVTVAVSPPM AMQISPTNSG DEQVLSSNSS PAATTAGAAT SRVLRACTSA  180
PEILEENDRL RRENSQLSEE LSRLRSLCGN IYNMMSNYAA NQGEASTSAL AEGGALDLIQ  240
CIPEEGAAAA GSGGGTAEQE GEMCARIFGV SIGAKRLRKN EDEEGGDQVQ LRGTGAKFEP  300
LDPGSNENPD PPWLDNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.11e-78HSF family protein