PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11044.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 298aa MW: 33522.4 Da PI: 9.9424

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	72	117	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+++W++Ia+ + gR++k+c++rw++ PIN11044.1 72 RGHWRPHEDAKLKQLVSQFGPHNWNLIAQNLE-GRSGKSCRLRWFNQ 117 899***************************.*********996 PP
2	Myb_DNA-binding	57.7	2.7e-18	124	167	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a+k++G++ W+ Iar ++ gRt++ +k++w+ PIN11044.1 124 RRSFSEEEEERLLAAHKLYGNK-WAMIARLLP-GRTDNAVKNHWHV 167 6789****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MTFVAPPDAP LFRVQETGAR GSTGTGFDEI LNNNLKSFDS LKDEGVMNWE YNGSEEDKIG 60 RKNNGVTKLC SRGHWRPHED AKLKQLVSQF GPHNWNLIAQ NLEGRSGKSC RLRWFNQLDP 120 RINRRSFSEE EEERLLAAHK LYGNKWAMIA RLLPGRTDNA VKNHWHVIMA RKHRELNCVY 180 RRRKPSLLQV QRKGFPSISN LQTPHASSES TISSSSNNVH QQNVTRSEDG GERLVLAVGG 240 SEIKNQDHQI AHSDYYSNSQ VSAASQSVAA NKRANLFTCG ENHTGKITFI DFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	8e-63	MYB family protein