PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11110.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 223aa    MW: 24857.6 Da    PI: 5.796
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.27.4e-4071071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp  +r++a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  PIN11110.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVGDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLK 105
                 7*************************89********************************************************************999 PP

      DUF260  99 ee 100
                 e+
  PIN11110.1 106 EQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVGD  60
RSEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKEQAAQ CIINSSNTSN  120
PNGDNHYPNF PQDVQSWWQS LQSQGTIMPQ FEANLDNNLE NIPYYSQYGA VNLNPSHVKY  180
EENSTSFGSM DSLEMQPNER QWGFQEDADD LQSLAFRYIN QHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.17e-59LBD family protein