PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11112.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 195aa    MW: 22312.1 Da    PI: 9.9612
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-053254123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C+k F++   L  H+++H
  PIN11112.1 32 YRCSFCKKEFKSAQALGGHMNVH 54
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEKLKWGNSW DGANLSFEKD RAYGFSWPQR NYRCSFCKKE FKSAQALGGH MNVHRRDRAR  60
MRLSPNSCDS PSPNPNPNPN ANPTPNSKPS FSLSSSSFKV LPYNMGWQYS SSSSSLSQEK  120
GLMVVDRTKR DVVSTFCRED EGGKKKESMI EFTSFTRRKD ARVWKGNEFV RLDLNLGMIQ  180
DGKEDLDLEL RLGYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-29C2H2 family protein