PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11113.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 190aa    MW: 21811.7 Da    PI: 5.091
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000223254123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  PIN11113.1 32 YECVFCKRGFNTAQALGGHMNIH 54
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MESNYHEDQS MNSSDDQEID QENNDLGVGR SYECVFCKRG FNTAQALGGH MNIHRKDRAR  60
KKPTTSNHSN KHEEIYTGPR FYQQIPTSNY CNNNIQVSSA GGYHLDQSHN YDRQAANLSY  120
ATYFPASSSV TRSDESDRDP PQPLDQVSRG DWSMSVGLEL SQRIMEDLDK KRQVMSQKEE  180
MDLELRLGYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.15e-16C2H2 family protein