PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11117.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 88aa    MW: 10420.2 Da    PI: 6.7906
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.48.4e-17761150
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......k 50
                +ppGfrFhPt+eelv +yL++k+++ k++l +vi ++d + +ePwd++       k
  PIN11117.1  7 VPPGFRFHPTEEELVGHYLRRKINSMKIDL-DVIIDIDPCPMEPWDIQGmlfilhK 61
                69****************************.99**************833444432 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGHYLRRKIN SMKIDLDVII DIDPCPMEPW DIQGMLFILH  60
KKYAKERPKY HIIDPLGDPN KAIRHMHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-22NAC family protein