PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11128.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 231aa MW: 26967.4 Da PI: 8.3753

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62	9.3e-20	66	118	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k PIN11128.1 66 KKRLSNEQLELLENSFQEEIKLDPDRKIKLAKELGLQPRQIAVWFQNRRARWK 118 5569************************************************9 PP
2	HD-ZIP_I/II	120.8	6.8e-39	65	155	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rls+eq++lLE+sF+ee kL+p+rK +la+eLglqprq+avWFqnrRAR+k+kqlE+ y+aLk+++da+++++++L++ev +Lr+ lk PIN11128.1 65 KKKRLSNEQLELLENSFQEEIKLDPDRKIKLAKELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEFDAVSRDKQKLQQEVLALRAILK 155 9**************************************************************************************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDWNGNVRVP FFFRPENAFS FLYNYNYDQF PVLEMKQPSM QATTQHAMLP TLMDQKTSNY 60 GQDPKKKRLS NEQLELLENS FQEEIKLDPD RKIKLAKELG LQPRQIAVWF QNRRARWKAK 120 QLERLYDALK QEFDAVSRDK QKLQQEVLAL RAILKDQVGK KQVSAGYTEI SGEETVESTS 180 IPSSDKPNNL HQIAECSYNT LNVDDYNNNN HNNKNNINNP VIITPYWPSL P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	94	KKKRLSNEQLELLENSFQEEIKLDPDRKIK
2	113	121	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-44	HD-ZIP family protein