PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11232.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 231aa MW: 25771 Da PI: 9.6278

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.7e-19	37	82	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v+++G ++W++I++++ gR++k+c++rw + PIN11232.1 37 KGPWSAEEDKILTRLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 82 79***************************9.*********985 PP
2	Myb_DNA-binding	54.8	2.2e-17	91	133	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++t Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ PIN11232.1 91 PFSTAEDDTILAAHEKYGNR-WATIARLLP-GRTDNAVKNHWNST 133 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDMLNRCSSV SSSSSDSSSD TSSLSGSKTL NNSERIKGPW SAEEDKILTR LVERYGARNW 60 SLISKYIKGR SGKSCRLRWC NQLSPNVEHR PFSTAEDDTI LAAHEKYGNR WATIARLLPG 120 RTDNAVKNHW NSTLKRRYQL QQQQKVQKIE GPKNGGDMRI SVSPVGSDLD EYDPMTALSL 180 APPGMGIAAM PERRAESLPA GFWDVMRNVI AREVREYVTT SFPDASSGFP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-56	MYB family protein