PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11301.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 229aa MW: 25960.3 Da PI: 8.9333

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp +e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++s+ +++ PIN11301.1 14 LPPGFRFHPTDEELVVQYLKRKVLSCPLPA-SIIPEVDVCKSDPWDLP---GDSEQERYFFSTREVKYPNGNRSNRATGSGYWKATGLDKQIVSSrSNQ 108 79**************************.89***********...3467899*******************************985667 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+g+ pkg +tdWvmheyrl PIN11301.1 109 IVGMKKTLVFYRGKPPKGCRTDWVMHEYRL 138 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MEKLSLAKNG VLRLPPGFRF HPTDEELVVQ YLKRKVLSCP LPASIIPEVD VCKSDPWDLP 60 GDSEQERYFF STREVKYPNG NRSNRATGSG YWKATGLDKQ IVSSRSNQIV GMKKTLVFYR 120 GKPPKGCRTD WVMHEYRLIT AKNLPQENWV LCRIFFKRRN NKIDDHEGAV IQNRSGEPGS 180 VPVFYDFMAK ERADLNLLPA NSSSGSSGIT EISNRKDSDD HEESSSCNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-102	NAC family protein