PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11322.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 198aa    MW: 23105.1 Da    PI: 7.5392
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.7e-113483455
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 h e Er+RR+++ +    Lr+llP       ++K s  + L+ Av+YIk++q
  PIN11322.1 34 VHREYERQRRQEMGNLCGSLRTLLPReY---VKGKRSLPDQLQGAVNYIKDMQ 83
                5999**********************77...9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSTSNQRERP IPSGIQENEE KIRNDEIINA RKFVHREYER QRRQEMGNLC GSLRTLLPRE  60
YVKGKRSLPD QLQGAVNYIK DMQNNIHQLK AHRDNLKKSV NYLDSHQIDN LPNCVILNPC  120
PNGVEILIST IFEEKQGFSL PRILRELHDR GFDAVSCYSR KADNERSLHR IELEACNPPS  180
EDLAGLQERL EYMINFPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.16e-36bHLH family protein