PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11335.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 260aa MW: 28862.5 Da PI: 7.9154

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1e-18	117	171	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k PIN11335.1 117 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTK 171 678899***********************************************98 PP
2	HD-ZIP_I/II	122.7	1.7e-39	117	204	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ PIN11335.1 117 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK 204 69************************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MGIDDLCDTG LALGLGLSWA SSNGENKYQK PSAAQNNLKN SEPSLTLSLS GETLNPVKKV 60 DFDYNKVVCN DQGQDSAASS FSNVSVKRER DVGGDEVEIE RGCSRVSDED DDGSNGRKKL 120 RLTKAQSALL EESFKQHSTL NPKQKQDLAR ELKLRPRQVE VWFQNRRART KLKQTEVDCE 180 FLKKCCETLT DENRRLQKEL QELKLAQPLY MRLPAATLTM CPSCERIGGT GAAENAAKSP 240 FTMAPKPHFF NPFTNPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	174	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-81	HD-ZIP family protein